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biopet.biopet
Commits
92985895
Commit
92985895
authored
Apr 06, 2015
by
Peter van 't Hof
Browse files
Change docs at commandline arg
parent
5153a1fb
Changes
1
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public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/BiopetQScript.scala
View file @
92985895
...
...
@@ -33,7 +33,7 @@ trait BiopetQScript extends Configurable with GatkLogging {
@Argument
(
doc
=
"JSON / YAML config file(s)"
,
fullName
=
"config_file"
,
shortName
=
"config"
,
required
=
false
)
val
configfiles
:
List
[
File
]
=
Nil
@Argument
(
doc
=
"
JSON config file(s)
"
,
fullName
=
"config_value"
,
shortName
=
"cv"
,
required
=
false
)
@Argument
(
doc
=
"
Config values, value should be formatted like 'key=value' or 'path:path:key=value'
"
,
fullName
=
"config_value"
,
shortName
=
"cv"
,
required
=
false
)
val
configValues
:
List
[
String
]
=
Nil
var
outputDir
:
File
=
{
...
...
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