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8f0e4226

Commit 8f0e4226 authored 10 years ago by Wai Yi Leung

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Merge branch 'develop' of git.lumc.nl:biopet/biopet into feature-igvtools

parents 5d774cf9 bfdd3e42

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protected/basty/src/main/scala/nl/lumc/sasc/biopet/pipelines/basty/Basty.scala 6 additions, 3 deletions

...ain/scala/nl/lumc/sasc/biopet/pipelines/basty/Basty.scala
protected/biopet-gatk-pipelines/src/main/scala/nl/lumc/sasc/biopet/pipelines/gatk/GatkPipeline.scala 5 additions, 4 deletions

...ala/nl/lumc/sasc/biopet/pipelines/gatk/GatkPipeline.scala
public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/MultiSampleQScript.scala 15 additions, 8 deletions

...n/scala/nl/lumc/sasc/biopet/core/MultiSampleQScript.scala
public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/pipelines/MultisamplePipelineTemplate.scala 3 additions, 0 deletions

...c/sasc/biopet/pipelines/MultisamplePipelineTemplate.scala
public/carp/src/main/scala/nl/lumc/sasc/biopet/pipelines/carp/Carp.scala 4 additions, 2 deletions

.../main/scala/nl/lumc/sasc/biopet/pipelines/carp/Carp.scala
public/kopisu/src/main/scala/nl/lumc/sasc/biopet/pipelines/kopisu/Kopisu.scala 13 additions, 15 deletions

...n/scala/nl/lumc/sasc/biopet/pipelines/kopisu/Kopisu.scala
public/sage/src/main/scala/nl/lumc/sasc/biopet/pipelines/sage/Sage.scala 5 additions, 2 deletions

.../main/scala/nl/lumc/sasc/biopet/pipelines/sage/Sage.scala

with 51 additions and 34 deletions

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