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8bf162ad

Commit 8bf162ad authored 9 years ago by Peter van 't Hof

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Remove "reference" from testing

parent c82dc34f

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Changes 8

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protected/biopet-gatk-pipelines/src/test/scala/nl/lumc/sasc/biopet/pipelines/gatk/ShivaTest.scala 0 additions, 1 deletion

.../scala/nl/lumc/sasc/biopet/pipelines/gatk/ShivaTest.scala
protected/biopet-gatk-pipelines/src/test/scala/nl/lumc/sasc/biopet/pipelines/gatk/ShivaVariantcallingTest.scala 0 additions, 1 deletion

.../sasc/biopet/pipelines/gatk/ShivaVariantcallingTest.scala
public/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/picard/CollectAlignmentSummaryMetrics.scala 8 additions, 2 deletions

...et/extensions/picard/CollectAlignmentSummaryMetrics.scala
public/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/picard/CollectInsertSizeMetrics.scala 4 additions, 2 deletions

...c/biopet/extensions/picard/CollectInsertSizeMetrics.scala
public/carp/src/test/scala/nl/lumc/sasc/biopet/pipelines/carp/CarpTest.scala 0 additions, 1 deletion

...t/scala/nl/lumc/sasc/biopet/pipelines/carp/CarpTest.scala
public/gentrap/src/test/scala/nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala 0 additions, 1 deletion

...a/nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala
public/shiva/src/test/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaTest.scala 0 additions, 1 deletion

...scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaTest.scala
public/shiva/src/test/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaVariantcallingTest.scala 0 additions, 1 deletion

...sasc/biopet/pipelines/shiva/ShivaVariantcallingTest.scala

with 12 additions and 10 deletions

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