Commit 86c0c144 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

setupRetry calls setupretry of pipe functions

parent 15dda798
......@@ -74,6 +74,12 @@ class BiopetFifoPipe(val root: Configurable,
override def setResources(): Unit = {
combineResources(commands)
}
override def setupRetry(): Unit = {
super.setupRetry()
commands.foreach(_.setupRetry())
combineResources(commands)
}
}
object BiopetFifoPipe {
......
......@@ -49,6 +49,12 @@ class BiopetPipe(val commands: List[BiopetCommandLineFunction]) extends BiopetCo
combineResources(pipesJobs)
}
override def setupRetry(): Unit = {
super.setupRetry()
commands.foreach(_.setupRetry())
combineResources(commands)
}
override def defaultCoreMemory = 0.0
override def defaultThreads = 0
......
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