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85e3f91d

Commit 85e3f91d authored 10 years ago by bow

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Add gentrap scripts

parent b840a916

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gentrap/src/main/scripts/nl/lumc/sasc/biopet/pipelines/gentrap/scripts/aggr_base_count.R 224 additions, 0 deletions

...c/sasc/biopet/pipelines/gentrap/scripts/aggr_base_count.R
gentrap/src/main/scripts/nl/lumc/sasc/biopet/pipelines/gentrap/scripts/bam_rna.py 375 additions, 0 deletions

.../nl/lumc/sasc/biopet/pipelines/gentrap/scripts/bam_rna.py
gentrap/src/main/scripts/nl/lumc/sasc/biopet/pipelines/gentrap/scripts/gc_dist.py 157 additions, 0 deletions

.../nl/lumc/sasc/biopet/pipelines/gentrap/scripts/gc_dist.py
gentrap/src/main/scripts/nl/lumc/sasc/biopet/pipelines/gentrap/scripts/insert_dist.py 171 additions, 0 deletions

...lumc/sasc/biopet/pipelines/gentrap/scripts/insert_dist.py
gentrap/src/main/scripts/nl/lumc/sasc/biopet/pipelines/gentrap/scripts/parse_cuffcmp.py 141 additions, 0 deletions

...mc/sasc/biopet/pipelines/gentrap/scripts/parse_cuffcmp.py
gentrap/src/main/scripts/nl/lumc/sasc/biopet/pipelines/gentrap/scripts/pdf_report.py 601 additions, 0 deletions

.../lumc/sasc/biopet/pipelines/gentrap/scripts/pdf_report.py
gentrap/src/main/scripts/nl/lumc/sasc/biopet/pipelines/gentrap/scripts/rna_metrics.py 501 additions, 0 deletions

...lumc/sasc/biopet/pipelines/gentrap/scripts/rna_metrics.py

with 2170 additions and 0 deletions

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