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Commit 838dc52e authored by Wai Yi Leung's avatar Wai Yi Leung
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Change default settings. Move min_length of 8 to 15 (advise from Henk Buermans)

parent 9eb01b6b
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......@@ -55,14 +55,14 @@ class TinyCap(val root: Configurable) extends QScript
"best" -> true
),
"sickle" -> Map(
"lengthThreshold" -> 8
"lengthThreshold" -> 15
),
"fastqc" -> Map(
"sensitiveAdapterSearch" -> true
),
"cutadapt" -> Map(
"error_rate" -> 0.2,
"minimum_length" -> 8,
"minimum_length" -> 15,
"q" -> 30,
"default_clip_mode" -> "both",
"times" -> 2
......
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