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768d77cc

Commit 768d77cc authored 10 years ago by Peter van 't Hof

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Added sub path instead of submodule

parent 6da08ccb

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protected/biopet-gatk-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/gatk/GatkGeneral.scala 8 additions, 6 deletions

...ala/nl/lumc/sasc/biopet/extensions/gatk/GatkGeneral.scala
public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/extensions/bedtools/Bedtools.scala 1 addition, 0 deletions

...la/nl/lumc/sasc/biopet/extensions/bedtools/Bedtools.scala
public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/extensions/picard/Picard.scala 10 additions, 8 deletions

.../scala/nl/lumc/sasc/biopet/extensions/picard/Picard.scala
public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/extensions/sambamba/Sambamba.scala 3 additions, 1 deletion

...la/nl/lumc/sasc/biopet/extensions/sambamba/Sambamba.scala
public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/extensions/samtools/Samtools.scala 2 additions, 1 deletion

...la/nl/lumc/sasc/biopet/extensions/samtools/Samtools.scala
public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/extensions/seqtk/Seqtk.scala 2 additions, 1 deletion

...in/scala/nl/lumc/sasc/biopet/extensions/seqtk/Seqtk.scala

with 26 additions and 17 deletions

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