Commit 6ffdacf9 authored by bow's avatar bow
Browse files

Set default cutadapt minimum_length to 20 in Gentrap

parent a7b9890f
......@@ -90,6 +90,7 @@ class Gentrap(val root: Configurable) extends QScript with MultiSampleQScript wi
"batch" -> 4,
"format" -> "sam"
),
"cutadapt" -> Map("minimum_length" -> 20),
// avoid conflicts when merging since the MarkDuplicate tags often cause merges to fail
"picard" -> Map(
"programrecordid" -> "null"
......
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