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biopet.biopet
Commits
6f6a94c8
Commit
6f6a94c8
authored
Nov 12, 2015
by
Wai Yi Leung
Browse files
change "java -jar command" to biopet
parent
33fad7e1
Changes
1
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docs/pipelines/flexiprep.md
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6f6a94c8
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@@ -30,7 +30,7 @@ Note that the pipeline also works on unpaired reads where one should only provid
To start the pipeline (remove
`-run`
for a dry run):
```
bash
java
-jar
Biopet-0.2.0.jar
pipeline Flexiprep
-run
-outDir
myDir
\
biopet
pipeline Flexiprep
-run
-outDir
myDir
\
-R1
myFirstReadPair
-R2
mySecondReadPair
-sample
mySampleName
\
-library
myLibname
-config
mySettings.json
```
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