Commit 6e5f1478 authored by Sander Bollen's avatar Sander Bollen
Browse files

well.. it compiles

parent c2e8dbba
......@@ -85,7 +85,7 @@ class Fastqc(val root: Configurable) extends BiopetCommandLineFunction with Vers
/** return commandline to execute */
def cmdLine = required(executable) +
optional("--java", java_exe) +
optional("--java", javaExe) +
optional("--threads", threads) +
optional("--contaminants", contaminants) +
optional("--adapters", adapters) +
......
......@@ -35,7 +35,7 @@ class TinyCapTest extends TestNGSuite with Matchers {
def initPipeline(map: Map[String, Any]): TinyCap = {
new TinyCap() {
override def configName = "tinycap"
override def configNamespace = "tinycap"
override def globalConfig = new Config(map)
......
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