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6deb5726

Commit 6deb5726 authored 9 years ago by Peter van 't Hof

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Adding gmap_build

parent d6626c4e

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Changes 6

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public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/extensions/gmap/GmapBuild.scala 60 additions, 0 deletions

...scala/nl/lumc/sasc/biopet/extensions/gmap/GmapBuild.scala
public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/extensions/gmap/Gsnap.scala 1 addition, 1 deletion

...ain/scala/nl/lumc/sasc/biopet/extensions/gmap/Gsnap.scala
public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/pipelines/GenerateIndexes.scala 8 additions, 1 deletion

...scala/nl/lumc/sasc/biopet/pipelines/GenerateIndexes.scala
public/biopet-framework/src/test/scala/nl/lumc/sasc/biopet/extensions/GsnapTest.scala 1 addition, 0 deletions

...test/scala/nl/lumc/sasc/biopet/extensions/GsnapTest.scala
public/gentrap/src/test/scala/nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala 1 addition, 0 deletions

...a/nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala
public/mapping/src/main/scala/nl/lumc/sasc/biopet/pipelines/mapping/Mapping.scala 2 additions, 1 deletion

...scala/nl/lumc/sasc/biopet/pipelines/mapping/Mapping.scala

with 73 additions and 3 deletions

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