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6d343c05

Commit 6d343c05 authored 9 years ago by Peter van 't Hof

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Remove output folder when it's in the summary file

parent ee15cd5e

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Changes 6

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public/flexiprep/src/main/resources/nl/lumc/sasc/biopet/pipelines/flexiprep/flexiprepInputfiles.ssp 10 additions, 3 deletions

...c/sasc/biopet/pipelines/flexiprep/flexiprepInputfiles.ssp
public/flexiprep/src/main/resources/nl/lumc/sasc/biopet/pipelines/flexiprep/flexiprepOutputfiles.ssp 10 additions, 3 deletions

.../sasc/biopet/pipelines/flexiprep/flexiprepOutputfiles.ssp
public/mapping/src/main/resources/nl/lumc/sasc/biopet/pipelines/mapping/outputBamfiles.ssp 15 additions, 6 deletions

.../nl/lumc/sasc/biopet/pipelines/mapping/outputBamfiles.ssp
public/shiva/src/main/resources/nl/lumc/sasc/biopet/pipelines/shiva/outputBamfiles.ssp 0 additions, 50 deletions

...es/nl/lumc/sasc/biopet/pipelines/shiva/outputBamfiles.ssp
public/shiva/src/main/resources/nl/lumc/sasc/biopet/pipelines/shiva/outputVcfFiles.ssp 9 additions, 2 deletions

...es/nl/lumc/sasc/biopet/pipelines/shiva/outputVcfFiles.ssp
public/shiva/src/main/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaReport.scala 3 additions, 2 deletions

...ala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaReport.scala

with 47 additions and 66 deletions

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