Commit 6ca33f57 authored by Peter van 't Hof's avatar Peter van 't Hof

Raise memory

parent 6744e672
......@@ -58,6 +58,8 @@ class CatVariants(val root: Configurable) extends BiopetJavaCommandLineFunction
@Gather(classOf[org.broadinstitute.gatk.queue.function.scattergather.SimpleTextGatherFunction])
var log_to_file: File = _
override def defaultCoreMemory = 4.0
override def beforeGraph() = {
super.beforeGraph()
if (reference == null) reference = referenceFasta()
......
......@@ -29,6 +29,8 @@ class ValidateFastq(val root: Configurable) extends ToolCommandFunction {
@Input(doc = "Input R1 fastq file", required = false)
var r2Fastq: Option[File] = None
override def defaultCoreMemory = 4.0
override def cmdLine = super.cmdLine +
required("-i", r1Fastq) +
optional("-j", r2Fastq)
......
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