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biopet.biopet
Commits
6b7aaacf
Commit
6b7aaacf
authored
Nov 06, 2014
by
sajvanderzeeuw
Browse files
Changes made to alter the number of GC cores
parent
5c3e9590
Changes
1
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Inline
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biopet-framework/src/main/scala/nl/lumc/sasc/biopet/extensions/picard/SamToFastq.scala
View file @
6b7aaacf
...
...
@@ -6,6 +6,7 @@ import org.broadinstitute.gatk.utils.commandline.{ Input, Output, Argument }
class
SamToFastq
(
val
root
:
Configurable
)
extends
Picard
{
javaMainClass
=
"picard.sam.SamToFastq"
javaGCThreads
=
config
(
"gcthreads"
,
default
=
2
)
@Input
(
doc
=
"The input SAM or BAM files to analyze."
,
required
=
true
)
var
input
:
File
=
_
...
...
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