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Commit 5abe8248 authored by bow's avatar bow
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Update IntelliJ files

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.idea/libraries/Maven__org_slf4j_slf4j_log4j12_1_6_1.xml 0 → 100644
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<component name="libraryTable">
<library name="Maven: org.slf4j:slf4j-log4j12:1.6.1">
<CLASSES>
<root url="jar://$MAVEN_REPOSITORY$/org/slf4j/slf4j-log4j12/1.6.1/slf4j-log4j12-1.6.1.jar!/" />
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<JAVADOC>
<root url="jar://$MAVEN_REPOSITORY$/org/slf4j/slf4j-log4j12/1.6.1/slf4j-log4j12-1.6.1-javadoc.jar!/" />
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<SOURCES>
<root url="jar://$MAVEN_REPOSITORY$/org/slf4j/slf4j-log4j12/1.6.1/slf4j-log4j12-1.6.1-sources.jar!/" />
</SOURCES>
</library>
</component>
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.idea/libraries/Maven__org_testng_testng_6_8.xml 0 → 100644
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<component name="libraryTable">
<library name="Maven: org.testng:testng:6.8">
<CLASSES>
<root url="jar://$MAVEN_REPOSITORY$/org/testng/testng/6.8/testng-6.8.jar!/" />
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<root url="jar://$MAVEN_REPOSITORY$/org/testng/testng/6.8/testng-6.8-sources.jar!/" />
</SOURCES>
</library>
</component>
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.idea/libraries/Maven__org_xerial_snappy_snappy_java_1_0_3_rc3.xml 0 → 100644
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<component name="libraryTable">
<library name="Maven: org.xerial.snappy:snappy-java:1.0.3-rc3">
<CLASSES>
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<JAVADOC>
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<SOURCES>
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</SOURCES>
</library>
</component>
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.idea/libraries/Maven__org_yaml_snakeyaml_1_6.xml 0 → 100644
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<component name="libraryTable">
<library name="Maven: org.yaml:snakeyaml:1.6">
<CLASSES>
<root url="jar://$MAVEN_REPOSITORY$/org/yaml/snakeyaml/1.6/snakeyaml-1.6.jar!/" />
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<root url="jar://$MAVEN_REPOSITORY$/org/yaml/snakeyaml/1.6/snakeyaml-1.6-sources.jar!/" />
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</component>
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.idea/libraries/Maven__picard_picard_1_120_1579.xml 0 → 100644
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<component name="libraryTable">
<library name="Maven: picard:picard:1.120.1579">
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</library>
</component>
\ No newline at end of file
.idea/libraries/Maven__samtools_htsjdk_1_120_1620.xml 0 → 100644
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<component name="libraryTable">
<library name="Maven: samtools:htsjdk:1.120.1620">
<CLASSES>
<root url="jar://$MAVEN_REPOSITORY$/samtools/htsjdk/1.120.1620/htsjdk-1.120.1620.jar!/" />
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</library>
</component>
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.idea/libraries/Maven__stax_stax_1_2_0.xml 0 → 100644
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<component name="libraryTable">
<library name="Maven: stax:stax:1.2.0">
<CLASSES>
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</SOURCES>
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</component>
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.idea/libraries/Maven__stax_stax_api_1_0_1.xml 0 → 100644
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<component name="libraryTable">
<library name="Maven: stax:stax-api:1.0.1">
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<root url="jar://$MAVEN_REPOSITORY$/stax/stax-api/1.0.1/stax-api-1.0.1.jar!/" />
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</library>
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.idea/libraries/Maven__us_levk_drmaa_common_1_0.xml 0 → 100644
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<component name="libraryTable">
<library name="Maven: us.levk:drmaa-common:1.0">
<CLASSES>
<root url="jar://$MAVEN_REPOSITORY$/us/levk/drmaa-common/1.0/drmaa-common-1.0.jar!/" />
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</library>
</component>
\ No newline at end of file
.idea/libraries/Maven__us_levk_drmaa_gridengine_6_2u5.xml 0 → 100644
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<component name="libraryTable">
<library name="Maven: us.levk:drmaa-gridengine:6.2u5">
<CLASSES>
<root url="jar://$MAVEN_REPOSITORY$/us/levk/drmaa-gridengine/6.2u5/drmaa-gridengine-6.2u5.jar!/" />
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<JAVADOC>
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</SOURCES>
</library>
</component>
\ No newline at end of file
.idea/libraries/Maven__xml_apis_xml_apis_1_0_b2.xml 0 → 100644
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<component name="libraryTable">
<library name="Maven: xml-apis:xml-apis:1.0.b2">
<CLASSES>
<root url="jar://$MAVEN_REPOSITORY$/xml-apis/xml-apis/1.0.b2/xml-apis-1.0.b2.jar!/" />
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</library>
</component>
\ No newline at end of file
.idea/misc.xml 0 → 100644
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− 0
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<?xml version="1.0" encoding="UTF-8"?>
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<component name="MavenProjectsManager">
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</project>
\ No newline at end of file
.idea/modules.xml 0 → 100644
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<?xml version="1.0" encoding="UTF-8"?>
<project version="4">
<component name="ProjectModuleManager">
<modules>
<module fileurl="file://$PROJECT_DIR$/public/bammetrics/BamMetrics.iml" filepath="$PROJECT_DIR$/public/bammetrics/BamMetrics.iml" />
<module fileurl="file://$PROJECT_DIR$/protected/basty/Basty.iml" filepath="$PROJECT_DIR$/protected/basty/Basty.iml" />
<module fileurl="file://$PROJECT_DIR$/public/Biopet.iml" filepath="$PROJECT_DIR$/public/Biopet.iml" />
<module fileurl="file://$PROJECT_DIR$/public/biopet-framework/BiopetFramework.iml" filepath="$PROJECT_DIR$/public/biopet-framework/BiopetFramework.iml" />
<module fileurl="file://$PROJECT_DIR$/protected/BiopetGatk.iml" filepath="$PROJECT_DIR$/protected/BiopetGatk.iml" />
<module fileurl="file://$PROJECT_DIR$/protected/biopet-gatk-extensions/BiopetGatkExtensions.iml" filepath="$PROJECT_DIR$/protected/biopet-gatk-extensions/BiopetGatkExtensions.iml" />
<module fileurl="file://$PROJECT_DIR$/protected/biopet-gatk-pipelines/BiopetGatkPipelines.iml" filepath="$PROJECT_DIR$/protected/biopet-gatk-pipelines/BiopetGatkPipelines.iml" />
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</component>
</project>
\ No newline at end of file
.idea/scala_compiler.xml 0 → 100644
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<?xml version="1.0" encoding="UTF-8"?>
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<option name="deprecationWarnings" value="true" />
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<parameter value="$PROJECT_DIR$/public/sage/target/.scala_dependencies" />
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<parameter value="$PROJECT_DIR$/public/bammetrics/target/.scala_dependencies" />
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\ No newline at end of file
.idea/scopes/scope_settings.xml 0 → 100644
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\ No newline at end of file
.idea/vcs.xml 0 → 100644
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<?xml version="1.0" encoding="UTF-8"?>
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\ No newline at end of file
BiopetRoot.iml 0 → 100644
+ 13
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<?xml version="1.0" encoding="UTF-8"?>
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\ No newline at end of file
protected/BiopetGatk.iml 0 → 100644
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<?xml version="1.0" encoding="UTF-8"?>
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\ No newline at end of file
protected/basty/Basty.iml 0 → 100644
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<?xml version="1.0" encoding="UTF-8"?>
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protected/biopet-gatk-extensions/BiopetGatkExtensions.iml 0 → 100644
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− 0
View file @ 5abe8248
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