Commit 4c2905e2 authored by Sander Bollen's avatar Sander Bollen

fix cnMops.R

parent e1d52a35
......@@ -31,7 +31,7 @@ CNRoutput <- opt$cnr
windowLength <- opt$wl
bamFile <- args
BAMFiles <- strsplit(c(bamFile), " ")[[1]]
BAMFiles <- bamFile
bamDataRanges <- tryCatch(
{
getReadCountsFromBAM(BAMFiles, mode="paired", refSeqName=chromosome, WL=windowLength, parallel=opt$threads)
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment