Commit 3e58bd92 authored by Peter van 't Hof's avatar Peter van 't Hof

Code style fix

parent bb5776d8
......@@ -303,10 +303,9 @@ object VcfStats extends ToolCommand {
line.getID
}).toList ::: defaultGenotypeFields
val bedRecords = (cmdArgs.intervals match {
case Some(intervals) => BedRecordList.fromFile(intervals).validateContigs(cmdArgs.referenceFile)
case _ => BedRecordList.fromReference(cmdArgs.referenceFile)
case _ => BedRecordList.fromReference(cmdArgs.referenceFile)
}).combineOverlap.scatter(cmdArgs.binSize)
val intervals: List[Interval] = bedRecords.toSamIntervals.toList
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment