Commit 39c422cb authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Added check on no readgroups

parent fb9a86be
......@@ -150,7 +150,7 @@ trait MultisampleMappingTrait extends MultiSampleQScript
if (readGroup.getSample != sampleId) logger.warn("Sample ID readgroup in bam file is not the same")
if (readGroup.getLibrary != libId) logger.warn("Library ID readgroup in bam file is not the same")
readGroup.getSample == sampleId && readGroup.getLibrary == libId
})
}) && readGroups.nonEmpty
if (!readGroupOke || !dictOke) {
if (!readGroupOke && !correctReadgroups) Logging.addError(
......
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