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35dba66e

Commit 35dba66e authored 10 years ago by bow

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Merge branch 'feature-toolcommands' into 'develop'

Feature toolcommands

See merge request !18

parents 8cfa3ebd b7fbb9c2

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biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/BiopetExecutable.scala 4 additions, 1 deletion

...ain/scala/nl/lumc/sasc/biopet/core/BiopetExecutable.scala
biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/BedToInterval.scala 16 additions, 3 deletions

.../main/scala/nl/lumc/sasc/biopet/tools/BedToInterval.scala
biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/FastqSplitter.scala 19 additions, 8 deletions

.../main/scala/nl/lumc/sasc/biopet/tools/FastqSplitter.scala
biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/MpileupToVcf.scala 38 additions, 36 deletions

...c/main/scala/nl/lumc/sasc/biopet/tools/MpileupToVcf.scala

with 77 additions and 48 deletions

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