Commit 2d241e33 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Added adapters to summary

parent e32722e8
......@@ -201,7 +201,8 @@ class Fastqc(root: Configurable) extends nl.lumc.sasc.biopet.extensions.Fastqc(r
def summaryStats: Map[String, Any] = Map(
"per_base_sequence_quality" -> perBaseSequenceQuality,
"per_base_sequence_content" -> perBaseSequenceContent)
"per_base_sequence_content" -> perBaseSequenceContent,
"adapters" -> foundAdapters.map(x => x.name -> x.seq).toMap)
}
object Fastqc {
......
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