Commit 290bc3da authored by Wai Yi Leung's avatar Wai Yi Leung
Browse files

Merge branch 'issue164' into 'develop'

Issue164

See #164

See merge request !186
parents 738aa8db 1b98f533
......@@ -42,7 +42,7 @@ trait BastyTrait extends MultiSampleQScript {
lazy val shiva: ShivaTrait = new Shiva(qscript)
def summaryFile: File = new File(outputDir, "Sage.summary.json")
def summaryFile: File = new File(outputDir, "Basty.summary.json")
//TODO: Add summary
def summaryFiles: Map[String, File] = Map()
......
......@@ -269,7 +269,7 @@ trait ShivaTrait extends MultiSampleQScript with SummaryQScript with Reference {
}
}
lazy val variantcalling = if (config("multisample_sample_variantcalling", default = true).asBoolean) {
lazy val variantcalling = if (config("multisample_variantcalling", default = true).asBoolean) {
Some(makeVariantcalling(multisample = true))
} else None
......
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