Commit 27433f70 authored 9 years ago by Peter van 't Hof

Fix license

parent 43cd6298

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protected/biopet-gatk-pipelines/src/main/scala/nl/lumc/sasc/biopet/pipelines/gatk/variantcallers/HaplotypeCaller.scala 5 additions, 0 deletions

...iopet/pipelines/gatk/variantcallers/HaplotypeCaller.scala
protected/biopet-gatk-pipelines/src/main/scala/nl/lumc/sasc/biopet/pipelines/gatk/variantcallers/HaplotypeCallerAllele.scala 5 additions, 0 deletions

...pipelines/gatk/variantcallers/HaplotypeCallerAllele.scala
protected/biopet-gatk-pipelines/src/main/scala/nl/lumc/sasc/biopet/pipelines/gatk/variantcallers/HaplotypeCallerGvcf.scala 5 additions, 0 deletions

...t/pipelines/gatk/variantcallers/HaplotypeCallerGvcf.scala
protected/biopet-gatk-pipelines/src/main/scala/nl/lumc/sasc/biopet/pipelines/gatk/variantcallers/UnifiedGenotyper.scala 5 additions, 0 deletions

...opet/pipelines/gatk/variantcallers/UnifiedGenotyper.scala
protected/biopet-gatk-pipelines/src/main/scala/nl/lumc/sasc/biopet/pipelines/gatk/variantcallers/UnifiedGenotyperAllele.scala 5 additions, 0 deletions

...ipelines/gatk/variantcallers/UnifiedGenotyperAllele.scala
public/bammetrics/src/main/scala/nl/lumc/sasc/biopet/pipelines/bammetrics/TargetRegions.scala 15 additions, 0 deletions

...lumc/sasc/biopet/pipelines/bammetrics/TargetRegions.scala
public/biopet-core/src/main/resources/nl/lumc/sasc/biopet/core/report/ext/js/d3.v3.5.5.min.js 15 additions, 0 deletions

...s/nl/lumc/sasc/biopet/core/report/ext/js/d3.v3.5.5.min.js
public/biopet-core/src/main/scala/nl/lumc/sasc/biopet/core/annotations/Annotations.scala 15 additions, 0 deletions

...la/nl/lumc/sasc/biopet/core/annotations/Annotations.scala
public/biopet-core/src/test/scala/nl/lumc/sasc/biopet/core/MultiSampleQScriptTest.scala 15 additions, 0 deletions

...ala/nl/lumc/sasc/biopet/core/MultiSampleQScriptTest.scala
public/biopet-core/src/test/scala/nl/lumc/sasc/biopet/core/ReferenceTest.scala 15 additions, 0 deletions

...c/test/scala/nl/lumc/sasc/biopet/core/ReferenceTest.scala
public/biopet-core/src/test/scala/nl/lumc/sasc/biopet/core/report/MultisampleReportBuilderTest.scala 15 additions, 0 deletions

...asc/biopet/core/report/MultisampleReportBuilderTest.scala
public/biopet-core/src/test/scala/nl/lumc/sasc/biopet/core/report/ReportBuilderTest.scala 15 additions, 0 deletions

...a/nl/lumc/sasc/biopet/core/report/ReportBuilderTest.scala
public/biopet-core/src/test/scala/nl/lumc/sasc/biopet/core/report/ReportSectionTest.scala 15 additions, 0 deletions

...a/nl/lumc/sasc/biopet/core/report/ReportSectionTest.scala
public/biopet-core/src/test/scala/nl/lumc/sasc/biopet/core/summary/SummarizableTest.scala 15 additions, 0 deletions

...a/nl/lumc/sasc/biopet/core/summary/SummarizableTest.scala
public/biopet-core/src/test/scala/nl/lumc/sasc/biopet/core/summary/SummaryQScriptTest.scala 15 additions, 0 deletions

...nl/lumc/sasc/biopet/core/summary/SummaryQScriptTest.scala
public/biopet-core/src/test/scala/nl/lumc/sasc/biopet/core/summary/WriteSummaryTest.scala 15 additions, 0 deletions

...a/nl/lumc/sasc/biopet/core/summary/WriteSummaryTest.scala
public/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/Curl.scala 15 additions, 0 deletions

.../src/main/scala/nl/lumc/sasc/biopet/extensions/Curl.scala
public/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/Flash.scala 15 additions, 0 deletions

...src/main/scala/nl/lumc/sasc/biopet/extensions/Flash.scala
public/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/Pysvtools.scala 15 additions, 0 deletions

...main/scala/nl/lumc/sasc/biopet/extensions/Pysvtools.scala
public/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/TarExtract.scala 15 additions, 0 deletions

...ain/scala/nl/lumc/sasc/biopet/extensions/TarExtract.scala

with 250 additions and 0 deletions

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