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238d4d73

Commit 238d4d73 authored 10 years ago by Peter van 't Hof

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Added bam_to_fastq option

parent 3af83757

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biopet-framework/src/main/scala/nl/lumc/sasc/biopet/pipelines/gatk/GatkPipeline.scala 42 additions, 29 deletions

...ala/nl/lumc/sasc/biopet/pipelines/gatk/GatkPipeline.scala
biopet-framework/src/main/scala/nl/lumc/sasc/biopet/pipelines/mapping/Mapping.scala 7 additions, 4 deletions

...scala/nl/lumc/sasc/biopet/pipelines/mapping/Mapping.scala

with 49 additions and 33 deletions

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