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2299e7a9

Commit 2299e7a9 authored 7 years ago by Peter van 't Hof Committed by GitHub 7 years ago

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Merge pull request #37 from biopet/fix-BIOPET-621

Adding more output files to bamstats

parents 3ab8f781 6e959253

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Changes 7

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biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/bamstats/BamStats.scala 20 additions, 3 deletions

...n/scala/nl/lumc/sasc/biopet/tools/bamstats/BamStats.scala
biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/bamstats/Histogram.scala 29 additions, 3 deletions

.../scala/nl/lumc/sasc/biopet/tools/bamstats/Histogram.scala
biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/bamstats/Stats.scala 7 additions, 7 deletions

...main/scala/nl/lumc/sasc/biopet/tools/bamstats/Stats.scala
biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/flagstat/FlagstatCollector.scala 6 additions, 0 deletions

...l/lumc/sasc/biopet/tools/flagstat/FlagstatCollector.scala
biopet-tools/src/test/scala/nl/lumc/sasc/biopet/tools/bamstats/BamStatsTest.scala 37 additions, 0 deletions

...ala/nl/lumc/sasc/biopet/tools/bamstats/BamStatsTest.scala
biopet-tools/src/test/scala/nl/lumc/sasc/biopet/tools/bamstats/CountsTest.scala 1 addition, 1 deletion

...scala/nl/lumc/sasc/biopet/tools/bamstats/CountsTest.scala
biopet-tools/src/test/scala/nl/lumc/sasc/biopet/tools/bamstats/HistogramTest.scala 1 addition, 1 deletion

...la/nl/lumc/sasc/biopet/tools/bamstats/HistogramTest.scala

with 101 additions and 15 deletions

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