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biopet.biopet
Commits
1f0dda52
Commit
1f0dda52
authored
Feb 04, 2015
by
bow
Browse files
Ensure module name is not processed when parsing overrepresented sequences
parent
ba0e37f1
Changes
1
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Inline
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public/flexiprep/src/main/scala/nl/lumc/sasc/biopet/pipelines/flexiprep/Fastqc.scala
View file @
1f0dda52
...
...
@@ -120,7 +120,7 @@ class Fastqc(root: Configurable) extends nl.lumc.sasc.biopet.extensions.Fastqc(r
case
None
=>
Array
.
empty
[
String
]
case
Some
(
modLines
)
=>
for
(
line
<-
modLines
if
!
line
.
startsWith
(
"#"
);
line
<-
modLines
if
!
(
line
.
startsWith
(
"#"
)
||
line
.
startsWith
(
">"
))
;
values
=
line
.
split
(
"\t"
)
if
values
.
size
>=
4
)
yield
values
(
3
)
}
...
...
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