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biopet.biopet
Commits
16d2711f
Commit
16d2711f
authored
Nov 23, 2015
by
Peter van 't Hof
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Plain Diff
Bump to 0.5.0-RC2
parent
5f03d3de
Changes
27
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27 changed files
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30 additions
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30 deletions
+30
-30
external-example/pom.xml
external-example/pom.xml
+4
-4
pom.xml
pom.xml
+1
-1
protected/biopet-gatk-extensions/pom.xml
protected/biopet-gatk-extensions/pom.xml
+1
-1
protected/biopet-gatk-pipelines/pom.xml
protected/biopet-gatk-pipelines/pom.xml
+1
-1
protected/biopet-protected-package/pom.xml
protected/biopet-protected-package/pom.xml
+1
-1
protected/pom.xml
protected/pom.xml
+1
-1
public/bam2wig/pom.xml
public/bam2wig/pom.xml
+1
-1
public/bammetrics/pom.xml
public/bammetrics/pom.xml
+1
-1
public/basty/pom.xml
public/basty/pom.xml
+1
-1
public/biopet-core/pom.xml
public/biopet-core/pom.xml
+1
-1
public/biopet-extensions/pom.xml
public/biopet-extensions/pom.xml
+1
-1
public/biopet-public-package/pom.xml
public/biopet-public-package/pom.xml
+1
-1
public/biopet-tools-extensions/pom.xml
public/biopet-tools-extensions/pom.xml
+1
-1
public/biopet-tools-package/pom.xml
public/biopet-tools-package/pom.xml
+1
-1
public/biopet-tools/pom.xml
public/biopet-tools/pom.xml
+1
-1
public/biopet-utils/pom.xml
public/biopet-utils/pom.xml
+1
-1
public/carp/pom.xml
public/carp/pom.xml
+1
-1
public/flexiprep/pom.xml
public/flexiprep/pom.xml
+1
-1
public/gears/pom.xml
public/gears/pom.xml
+1
-1
public/gentrap/pom.xml
public/gentrap/pom.xml
+1
-1
public/kopisu/pom.xml
public/kopisu/pom.xml
+1
-1
public/mapping/pom.xml
public/mapping/pom.xml
+1
-1
public/pom.xml
public/pom.xml
+1
-1
public/sage/pom.xml
public/sage/pom.xml
+1
-1
public/shiva/pom.xml
public/shiva/pom.xml
+1
-1
public/toucan/pom.xml
public/toucan/pom.xml
+1
-1
public/yamsvp/pom.xml
public/yamsvp/pom.xml
+1
-1
No files found.
external-example/pom.xml
View file @
16d2711f
...
...
@@ -11,7 +11,7 @@
<artifactId>
ExternalExample
</artifactId>
<!--TODO: replace version, for a new pipeline it's advised to start with '0.1.0-SNAPSHOT' -->
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<properties>
<project.build.sourceEncoding>
UTF-8
</project.build.sourceEncoding>
...
...
@@ -40,19 +40,19 @@
<artifactId>
BiopetCore
</artifactId>
<!--TODO: replace version of pipeline to a fixed version -->
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
</dependency>
<dependency>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
BiopetExtensions
</artifactId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
</dependency>
<dependency>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
Shiva
</artifactId>
<!--TODO: replace version of pipeline to a fixed version -->
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
</dependency>
</dependencies>
...
...
pom.xml
View file @
16d2711f
...
...
@@ -9,7 +9,7 @@
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
Biopet
</artifactId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
public
</relativePath>
</parent>
...
...
protected/biopet-gatk-extensions/pom.xml
View file @
16d2711f
...
...
@@ -15,7 +15,7 @@
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
BiopetGatk
</artifactId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
...
...
protected/biopet-gatk-pipelines/pom.xml
View file @
16d2711f
...
...
@@ -15,7 +15,7 @@
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
BiopetGatk
</artifactId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
...
...
protected/biopet-protected-package/pom.xml
View file @
16d2711f
...
...
@@ -15,7 +15,7 @@
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
BiopetGatk
</artifactId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
...
...
protected/pom.xml
View file @
16d2711f
...
...
@@ -11,7 +11,7 @@
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
BiopetRoot
</artifactId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
<artifactId>
BiopetGatk
</artifactId>
...
...
public/bam2wig/pom.xml
View file @
16d2711f
...
...
@@ -27,7 +27,7 @@
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
Biopet
</artifactId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
...
...
public/bammetrics/pom.xml
View file @
16d2711f
...
...
@@ -25,7 +25,7 @@
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
Biopet
</artifactId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
...
...
public/basty/pom.xml
View file @
16d2711f
...
...
@@ -32,7 +32,7 @@
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
Biopet
</artifactId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
...
...
public/biopet-core/pom.xml
View file @
16d2711f
...
...
@@ -22,7 +22,7 @@
<parent>
<artifactId>
Biopet
</artifactId>
<groupId>
nl.lumc.sasc
</groupId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
<modelVersion>
4.0.0
</modelVersion>
...
...
public/biopet-extensions/pom.xml
View file @
16d2711f
...
...
@@ -22,7 +22,7 @@
<parent>
<artifactId>
Biopet
</artifactId>
<groupId>
nl.lumc.sasc
</groupId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
</parent>
<modelVersion>
4.0.0
</modelVersion>
...
...
public/biopet-public-package/pom.xml
View file @
16d2711f
...
...
@@ -25,7 +25,7 @@
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
Biopet
</artifactId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
...
...
public/biopet-tools-extensions/pom.xml
View file @
16d2711f
...
...
@@ -22,7 +22,7 @@
<parent>
<artifactId>
Biopet
</artifactId>
<groupId>
nl.lumc.sasc
</groupId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
</parent>
<modelVersion>
4.0.0
</modelVersion>
...
...
public/biopet-tools-package/pom.xml
View file @
16d2711f
...
...
@@ -22,7 +22,7 @@
<parent>
<artifactId>
Biopet
</artifactId>
<groupId>
nl.lumc.sasc
</groupId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
</parent>
<modelVersion>
4.0.0
</modelVersion>
...
...
public/biopet-tools/pom.xml
View file @
16d2711f
...
...
@@ -22,7 +22,7 @@
<parent>
<artifactId>
Biopet
</artifactId>
<groupId>
nl.lumc.sasc
</groupId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
<modelVersion>
4.0.0
</modelVersion>
...
...
public/biopet-utils/pom.xml
View file @
16d2711f
...
...
@@ -22,7 +22,7 @@
<parent>
<artifactId>
Biopet
</artifactId>
<groupId>
nl.lumc.sasc
</groupId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
<modelVersion>
4.0.0
</modelVersion>
...
...
public/carp/pom.xml
View file @
16d2711f
...
...
@@ -25,7 +25,7 @@
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
Biopet
</artifactId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
...
...
public/flexiprep/pom.xml
View file @
16d2711f
...
...
@@ -25,7 +25,7 @@
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
Biopet
</artifactId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
...
...
public/gears/pom.xml
View file @
16d2711f
...
...
@@ -22,7 +22,7 @@
<parent>
<artifactId>
Biopet
</artifactId>
<groupId>
nl.lumc.sasc
</groupId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
<modelVersion>
4.0.0
</modelVersion>
...
...
public/gentrap/pom.xml
View file @
16d2711f
...
...
@@ -25,7 +25,7 @@
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
Biopet
</artifactId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
...
...
public/kopisu/pom.xml
View file @
16d2711f
...
...
@@ -25,7 +25,7 @@
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
Biopet
</artifactId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
...
...
public/mapping/pom.xml
View file @
16d2711f
...
...
@@ -25,7 +25,7 @@
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
Biopet
</artifactId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
...
...
public/pom.xml
View file @
16d2711f
...
...
@@ -22,7 +22,7 @@
<groupId>
nl.lumc.sasc
</groupId>
<name>
Biopet
</name>
<packaging>
pom
</packaging>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<modules>
<!--<module>biopet-framework</module>-->
...
...
public/sage/pom.xml
View file @
16d2711f
...
...
@@ -25,7 +25,7 @@
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
Biopet
</artifactId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
...
...
public/shiva/pom.xml
View file @
16d2711f
...
...
@@ -22,7 +22,7 @@
<parent>
<artifactId>
Biopet
</artifactId>
<groupId>
nl.lumc.sasc
</groupId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
</parent>
<modelVersion>
4.0.0
</modelVersion>
...
...
public/toucan/pom.xml
View file @
16d2711f
...
...
@@ -25,7 +25,7 @@
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
Biopet
</artifactId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
...
...
public/yamsvp/pom.xml
View file @
16d2711f
...
...
@@ -25,7 +25,7 @@
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
Biopet
</artifactId>
<version>
0.5.0-RC
1
</version>
<version>
0.5.0-RC
2
</version>
<relativePath>
../
</relativePath>
</parent>
...
...
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