fix compile error

public/biopet-tools-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/tools/GvcfToBed.scala

@@ -2,14 +2,14 @@ package nl.lumc.sasc.biopet.extensions.tools
 
 import java.io.File
 
-import nl.lumc.sasc.biopet.core.ToolCommandFuntion
+import nl.lumc.sasc.biopet.core.ToolCommandFunction
 import nl.lumc.sasc.biopet.utils.config.Configurable
 import org.broadinstitute.gatk.utils.commandline.{ Argument, Output, Input }
 
 /**
  * Created by ahbbollen on 13-10-15.
  */
-class GvcfToBed(val root: Configurable) extends ToolCommandFuntion {
+class GvcfToBed(val root: Configurable) extends ToolCommandFunction {
   def toolObject = nl.lumc.sasc.biopet.tools.GvcfToBed
 
   @Input(doc = "input vcf")

public/biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/GvcfToBed.scala

@@ -79,8 +79,10 @@ object GvcfToBed extends ToolCommand {
    * @return
    */
   def hasMinGenomeQuality(record: VariantContext, sample: Option[String], minGQ: Int): Boolean = {
-    sample foreach { x => if (!record.getSampleNamesOrderedByName.contains(x))
-      throw new IllegalArgumentException("Sample does not exist")}
+    sample foreach { x =>
+      if (!record.getSampleNamesOrderedByName.contains(x))
+        throw new IllegalArgumentException("Sample does not exist")
+    }
     val gt = record.getGenotype(sample.getOrElse(record.getSampleNamesOrderedByName.head))
     gt.hasGQ && gt.getGQ >= minGQ
   }

public/biopet-tools/src/test/scala/nl/lumc/sasc/biopet/tools/GvcfToBedTest.scala

@@ -46,7 +46,7 @@ class GvcfToBedTest extends TestNGSuite with Matchers with MockitoSugar {
     val reader = new VCFFileReader(vepped, false)
     val record = reader.iterator().next()
 
-    an [IllegalArgumentException] should be thrownBy hasMinGenomeQuality(record, Some("dummy"), 99)
+    an[IllegalArgumentException] should be thrownBy hasMinGenomeQuality(record, Some("dummy"), 99)
   }
 
   @Test def testCreateBedRecord = {