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Created with Raphaël 2.2.019Jun17161514138May12Mar11109828Jan15Dec141312112Nov31Aug30109731Jul281828Jun272625201619May17161716151110986432130Apr2928Fix requirement for `Debug` element in `Clone` implementation of `DenseMatrix`Release v0.7.3v0.7.3v0.7.3Add documentation to the `transfac` module of `lightmotif-io`Use `Error::source` instead of `Error::cause` in `lightmotif-io`Improve `lightmotif-io` error type with `Arc` for internal errors and support for `Clone`Improve documentation of `lightmotif_io::transfac`Document methods of `jaspar16::Record` in `lightmotif-io`Use aligned loads in AVX2 implementation of `Score`Fix incorrect alignment handling in `DenseMatrix`Fix default alignment used for x86-64 and Aarch64Manually implement `Clone` for `DenseMatrix` to enforce memory alignmentHotfix issue with alignment of data in AVX2 codeRename JASPAR (2016) benchmark in `lightmotif-io`Make AVX2 implementation of `score_into` with `gather` more genericUse `_mm256_permutevar8x32_ps` in AVX2 `Score` to avoid special case for default Dna symbolAdd helper functions to read any format in `lightmotif-io`Add `lightmotif-io` module to parse the raw JASPAR formatFix issue with scoring of an empty range of rowsFix striping of empty sequence panicking with AVX2 implementationRemove unused file from `lightmotif-tfmpvalue` [ci skip]Use substraction in `FrequencyMatrix.to_scoring` methodRelease v0.7.2v0.7.2v0.7.2Implement `__getitem__` for row access for matrices of `lightmotif-py`Allow changing log base in `WeightMatrix.log_odds` methodAdd `__len__` implementation for all matrix classes of `lightmotif-py`Release v0.7.1v0.7.1v0.7.1Fix resizing of striped scores in NEON score implementationRelease v0.7.0v0.7.0v0.7.0Fix compilation of NEON code [ci skip]Remove `lightmotif-transfac` from workspace [ci skip]Remove the deprecated `lightmotif-transfac` crateRemove direct mutable access to `StripedSequence` attributesReplace direct attribute access with getters in `StripedSequence`Update `cibuildwheel` used in Actions workflows to latest releaseAdd benchmark for striping an encoded sequenceFix issue in NEON platform codeAvoid consuming the scanner in `Scanner.best` methodUse a single `Scanner` type in `lightmotif::scan`Implement a scanning algorithm for finding hits in a sequenceReorganize code for striped scores