Remove unused notebook, add data files

README

-Assignments for [python programming course] (https://git.lumc.nl)
+Programming course assignments
\ No newline at end of file
+==============================
+
+This repository contains some assignment material for the first installment
+(August 2013) of a programming course for scientists organised by the
+department of Human Genetics of the Leiden University Medical Center.
+
+See the [Trac Wiki](https://humgenprojects.lumc.nl/trac/programming-course)
+for more information.

assignments.ipynb

-{
- "metadata": {
-  "name": ""
- },
- "nbformat": 3,
- "nbformat_minor": 0,
- "worksheets": [
-  {
-   "cells": [
-    {
-     "cell_type": "markdown",
-     "metadata": {
-      "slideshow": {
-       "slide_type": "slide"
-      }
-     },
-     "source": [
-      "Homework - Day 1\n",
-      "===\n",
-      "\n",
-      "http://rosalind.info\n",
-      "\n",
-      "<iframe src=\"http://rosalind.info\" width=1024 height=500></iframe>"
-     ]
-    },
-    {
-     "cell_type": "markdown",
-     "metadata": {
-      "slideshow": {
-       "slide_type": "subslide"
-      }
-     },
-     "source": [
-      "Problem ID\n",
-      "===\n",
-      "\n",
-      "[DNA](http://rosalind.info/problems/dna)  : Counting DNA Nucleotides \n",
-      "\n",
-      "[RNA](http://rosalind.info/problems/rna/)  : Transcribing DNA into RNA \n",
-      "\n",
-      "[REVC](http://rosalind.info/problems/revc/) : Complementing a Strand of DNA \n",
-      "\n",
-      "[GC](http://rosalind.info/problems/gc/)   : Computing GC Content \n",
-      "\n",
-      "[HAMM](http://rosalind.info/problems/hamm/): Counting Point Mutations \n"
-     ]
-    },
-    {
-     "cell_type": "code",
-     "collapsed": false,
-     "input": [],
-     "language": "python",
-     "metadata": {},
-     "outputs": []
-    }
-   ],
-   "metadata": {}
-  }
- ]
-}
\ No newline at end of file

data/populations.txt

+# year	hare	lynx	carrot
+1900	30e3	4e3	48300
+1901	47.2e3	6.1e3	48200
+1902	70.2e3	9.8e3	41500
+1903	77.4e3	35.2e3	38200
+1904	36.3e3	59.4e3	40600
+1905	20.6e3	41.7e3	39800
+1906	18.1e3	19e3	38600
+1907	21.4e3	13e3	42300
+1908	22e3	8.3e3	44500
+1909	25.4e3	9.1e3	42100
+1910	27.1e3	7.4e3	46000
+1911	40.3e3	8e3	46800
+1912	57e3	12.3e3	43800
+1913	76.6e3	19.5e3	40900
+1914	52.3e3	45.7e3	39400
+1915	19.5e3	51.1e3	39000
+1916	11.2e3	29.7e3	36700
+1917	7.6e3	15.8e3	41800
+1918	14.6e3	9.7e3	43300
+1919	16.2e3	10.1e3	41300
+1920	24.7e3	8.6e3	47300

data/seq.txt

+AGCTAG
+TATCGTA
+TGTAGAT
+GAGATCGTAGATC

data/short_file.txt

+this short file has two lines
+it is used in the example code