Commits · 8d77e9511151abf85a6d8c898b7a07926aa9ff1d · Klinische Genetica / capture-lumc / vtools

29 Mar, 2019 2 commits
- Merge branch 'class-method-refrecord' into 'master' · 8d77e951
  Sander Bollen authored Mar 29, 2019
```
slight refactor

See merge request !2
```
  8d77e951
- slight refactor · 6b03f535
  Sander Bollen authored Mar 29, 2019
  
  6b03f535
19 Mar, 2019 1 commit
- use numpy.get_includes in C-extensions · 896ae2ed
  Bollen authored Mar 19, 2019
  
  896ae2ed
18 Mar, 2019 10 commits
- -y · bda5fd58
  Sander Bollen authored Mar 18, 2019
  
  bda5fd58
- update package list · ab587823
  Sander Bollen authored Mar 18, 2019
  
  ab587823
- numpy fix again · d3220763
  Sander Bollen authored Mar 18, 2019
  
  d3220763
- fix · 4d6ef28b
  Sander Bollen authored Mar 18, 2019
  
  4d6ef28b
- trial more · 98eb9d6a
  Sander Bollen authored Mar 18, 2019
  
  98eb9d6a
- manually add numpy · a164bcdf
  Sander Bollen authored Mar 18, 2019
  
  a164bcdf
- correct image · 35a6dc65
  Sander Bollen authored Mar 18, 2019
  
  35a6dc65
- correct image · 9f6997bc
  Sander Bollen authored Mar 18, 2019
  
  9f6997bc
- correct image · eec76529
  Sander Bollen authored Mar 18, 2019
  
  eec76529
- find_packages · 4cbe9d6d
  Sander Bollen authored Mar 18, 2019
  
  4cbe9d6d
07 Jun, 2018 1 commit
- add minimum gq · 51d9fb26
  Sander Bollen authored Jun 07, 2018
  
  51d9fb26
08 May, 2018 2 commits
- add cli for evaluation · 4ef71d0e
  Sander Bollen authored May 08, 2018
  
  4ef71d0e
- add site concordancy function · 103371d5
  Sander Bollen authored May 08, 2018
  
  103371d5
25 Apr, 2018 1 commit
- immediately return upon hitting one filter criterium by default · 5bfe55f2
  Sander Bollen authored Apr 25, 2018
  
  5bfe55f2
16 Apr, 2018 1 commit
- remove tqdm in filter · 4a45e848
  Sander Bollen authored Apr 16, 2018
  
  4a45e848
03 Apr, 2018 1 commit
- fix wrong size estimation for gq qualities. · 7be3d1fe
  Sander Bollen authored Apr 03, 2018
  
  7be3d1fe
12 Mar, 2018 1 commit
- fix setup.py for installs · 9de1db12
  Sander Bollen authored Mar 12, 2018
  
  9de1db12
01 Mar, 2018 4 commits
- add .gitlab-ci.yml · f36428c8
  Sander Bollen authored Mar 01, 2018
  
  f36428c8
- add requirements.txt · 7ecf0e95
  Sander Bollen authored Mar 01, 2018
  
  7ecf0e95
- add tqdm to setup requirements · e53e8afa
  Sander Bollen authored Mar 01, 2018
  
  e53e8afa
- Add LICENSE · 95cced04
  Sander Bollen authored Mar 01, 2018
  
  95cced04
16 Feb, 2018 3 commits
- move get_af to cython · 677a4ecc
  Sander Bollen authored Feb 16, 2018
  
  677a4ecc
- small fixes · 7ccf374f
  Sander Bollen authored Feb 16, 2018
  
  7ccf374f
- cythonize stats · 03894b0d
  Sander Bollen authored Feb 16, 2018
  
  03894b0d
13 Feb, 2018 11 commits
- add maxlen arguments to prevent huge records. · 28ea8217
  Sander Bollen authored Feb 13, 2018
  
  28ea8217
- pep8 · be166c78
  Sander Bollen authored Feb 13, 2018
  
  be166c78
- further speed increases · 47c5a59f
  Sander Bollen authored Feb 13, 2018
  
  47c5a59f
- Rewrite atleast functions in cython. · 1750cf57
  Sander Bollen authored Feb 13, 2018
```
90% speedup.
```
  1750cf57
- add setup to install module · 331eee9c
  Sander Bollen authored Feb 13, 2018
  
  331eee9c
- license stuff · 020fbe4a
  Sander Bollen authored Feb 13, 2018
  
  020fbe4a
- clis in cli module · b1e82222
  Sander Bollen authored Feb 13, 2018
  
  b1e82222
- cyvcf2 has since been updated such that transitions also work in python 3 · e929c1ae
  Sander Bollen authored Feb 13, 2018
  
  e929c1ae
- original scripts · 2d051084
  Sander Bollen authored Feb 13, 2018
  
  2d051084
- readme and setup dummies · eef48e04
  Sander Bollen authored Feb 13, 2018
  
  eef48e04
- Initial commit · 81dfa66e
  Sander Bollen authored Feb 13, 2018
  
  81dfa66e