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Klinische Genetica
capture-lumc
vcf-to-varda
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!1
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Merged
Gitlab ci
gitlab-ci
into
devel
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0
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11
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1
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1
Merged
van den Berg
requested to merge
gitlab-ci
into
devel
4 years ago
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Add pytest-workflow tests and enable gitlab-ci integration, including the slurm runner.
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b6ec5dae
Add gitlab-ci file
· b6ec5dae
van den Berg
authored
4 years ago
.gitlab-ci.yml
0 → 100644
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Options
variables
:
GIT_SUBMODULE_STRATEGY
:
recursive
.before_script_anchor
:
&before_script_anchor
before_script
:
-
pip3 install pytest-workflow
stages
:
-
sanity
-
dry-run
test-sanity
:
<<
:
*before_script_anchor
script
:
-
pytest --tag sanity
image
:
lumc/singularity-snakemake:3.5.2-5.15.0
tags
:
-
docker
stage
:
sanity
test-dry-run
:
<<
:
*before_script_anchor
script
:
-
pytest --tag dry-run
image
:
lumc/singularity-snakemake:3.5.2-5.15.0
tags
:
-
docker
stage
:
dry-run
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