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Commit daa4dfbf authored by Sander Bollen's avatar Sander Bollen
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use vtools container for merge-stats due to dependency on click

parent 2e59f7e1
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......@@ -719,7 +719,7 @@ rule stats_tsv:
sc=tsvpy
output:
stats="stats.tsv"
singularity: "docker://python:3.6-slim"
singularity: "docker://quay.io/biocontainers/vtools:1.0.0--py37h3010b51_0"
conda: "envs/collectstats.yml"
shell: "python {input.sc} -i {input.stats} > {output.stats}"
......
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