rulegraph in readme

README.md

+# hutspot
+
+
+# graph
+
+```plantuml
+digraph snakemake_dag {
+    graph[bgcolor=white, margin=0];
+    node[shape=box, style=rounded, fontname=sans,                 fontsize=10, penwidth=2];
+    edge[penwidth=2, color=grey];
+	0[label = "all", color = "0.32 0.6 0.85", style="rounded"];
+	1[label = "fastqc_postqc", color = "0.48 0.6 0.85", style="rounded"];
+	2[label = "fastqc_raw", color = "0.05 0.6 0.85", style="rounded"];
+	3[label = "fastqc_merged", color = "0.57 0.6 0.85", style="rounded"];
+	4[label = "merge_stats", color = "0.21 0.6 0.85", style="rounded"];
+	5[label = "genotype_gather", color = "0.37 0.6 0.85", style="rounded"];
+	6[label = "cutadapt", color = "0.30 0.6 0.85", style="rounded"];
+	7[label = "merge_r2", color = "0.60 0.6 0.85", style="rounded"];
+	8[label = "merge_r1", color = "0.23 0.6 0.85", style="rounded"];
+	9[label = "collectstats", color = "0.02 0.6 0.85", style="rounded"];
+	10[label = "vcfstats", color = "0.07 0.6 0.85", style="rounded"];
+	11[label = "genotype_scatter", color = "0.16 0.6 0.85", style="rounded"];
+	12[label = "sickle", color = "0.46 0.6 0.85", style="rounded"];
+	13[label = "mapped_num", color = "0.64 0.6 0.85", style="rounded"];
+	14[label = "fqcount_postqc", color = "0.00 0.6 0.85", style="rounded"];
+	15[label = "unique_num", color = "0.11 0.6 0.85", style="rounded"];
+	16[label = "covstats", color = "0.41 0.6 0.85", style="rounded"];
+	17[label = "fqcount_preqc", color = "0.62 0.6 0.85", style="rounded"];
+	18[label = "usable_basenum", color = "0.14 0.6 0.85", style="rounded"];
+	19[label = "mapped_basenum", color = "0.09 0.6 0.85", style="rounded"];
+	20[label = "gvcf_gather", color = "0.55 0.6 0.85", style="rounded"];
+	21[label = "seqtk_r2", color = "0.51 0.6 0.85", style="rounded"];
+	22[label = "seqtk_r1", color = "0.28 0.6 0.85", style="rounded"];
+	23[label = "align", color = "0.25 0.6 0.85", style="rounded"];
+	24[label = "markdup", color = "0.18 0.6 0.85", style="rounded"];
+	25[label = "genome", color = "0.53 0.6 0.85", style="rounded"];
+	26[label = "gvcf_scatter", color = "0.34 0.6 0.85", style="rounded"];
+	27[label = "printreads", color = "0.39 0.6 0.85", style="rounded"];
+	28[label = "baserecal", color = "0.44 0.6 0.85", style="rounded"];
+	4 -> 0
+	2 -> 0
+	1 -> 0
+	5 -> 0 [color="red"]
+	3 -> 0
+	6 -> 1
+	8 -> 3
+	7 -> 3
+	10 -> 4
+	9 -> 4
+	11 -> 5 [color="red"]
+	12 -> 6 [color="red"]
+	14 -> 9
+	19 -> 9
+	18 -> 9
+	16 -> 9
+	15 -> 9
+	17 -> 9
+	13 -> 9
+	5 -> 10
+	20 -> 11 [color="red"]
+	22 -> 12 [color="red"]
+	21 -> 12 [color="red"]
+	23 -> 13
+	6 -> 14
+	24 -> 15
+	24 -> 16
+	25 -> 16
+	8 -> 17 [color="red"]
+	7 -> 17 [color="red"]
+	24 -> 18
+	23 -> 19
+	26 -> 20 [color="red"]
+	17 -> 21 [color="red"]
+	7 -> 21 [color="red"]
+	17 -> 22 [color="red"]
+	8 -> 22 [color="red"]
+	6 -> 23 [color="red"]
+	23 -> 24 [color="red"]
+	27 -> 26 [color="red"]
+	24 -> 27 [color="red"]
+	28 -> 27 [color="red"]
+	24 -> 28 [color="red"]
+}  
+```
\ No newline at end of file