varscan module for GENTRAP
General Analysis Pipeline for Second generation Sequencing
Slides for a presentation on alignment methods
Quick search for a large DMD deletion in GoNL
Rig framework pipeline -- capmetrix
Run the Grid part of the alternative polyadenylation pipeline
Basic exome variant calling pipeline
Presentations and posters on Mutalyzer
bcftools tool wrapper for the Rig framework
freebayes tool wrapper for the Rig framework
samtools tool wrapper for the Rig framework
Generic repository for everything which doesn't fit in other repositories.
Generic transcriptome analysis pipeline
Mirror of Open Grid Engine code -- with modifications
Rig framework pipeline -- gatk02_2