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Run the Grid part of the alternative polyadenylation pipeline
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Mirrors / ansible-role-mutalyzer
MIT LicenseUpdated -
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This pipeline takes paired-end fastq files, does a quick genome assembly on them (via Velvet + kmergenie), and predicts antibiotic resistance via abricate.
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Allele-specific expression (a.k.a. differential allelic expression) in breast cancer
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Sam Nooij / Automated bacterial assembly from PacBio HiFi
BSD 3-Clause "New" or "Revised" LicenseAutomated and parallelised workflow to assemble PacBio HiFi reads of bacteria whole-genome sequencing. Also subsamples reads before assembly and re-orients resulting contigs to the 'correct' starting position.
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Mirrors / backtranslate
MIT LicenseUpdated -
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Khachatryan / barcode
MIT LicenseUpdated