Explore projects

Scripts and modules for working with various bio-related data

Detect alternative polyadenylation in RNA-Seq data

Repository to store my scripts (that can be useful for others as well).

NGS LIMS

Basic chip-seq analysis pipeline

Modular Makefiles for data analysis pipelines

Modular framework for bioinformatics pipelines

Flexible illumina sequence preprocessing pipeline

Extracting transcript mappings from genbank files

Profiling k-mer pairwise comparison

Tools for the summer 2014 server migration

Assignments for our programming course

Interface generator for command line programs

Comparisons of the Flexiprep pipeline implemented with various frameworks

General Analysis Pipeline for Second generation Sequencing