Explore projects

Use Kraken2 to quickly classify metagenomic reads and extract reads of taxa of interest to then assemble metagenomic assembled genomes (MAGs)

An automated workflow for taxonomically classifying assembled scaffolds from metagenomics data.

An automated workflow for generating metagenomic assemblies with a focus on reconstructing plasmids.

Screen fecal metagenomes of polyposis patients for the presence of the pks gene island of procarcinogenic E. coli

Microbiota analyses of metagenomic samples of ulcerative colitis patients and fecal microbiota transplantation donors in the FECBUD trial

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