Explore projects

Cython bindings and Python interface to Tantan, a fast method for identifying repeats in DNA and protein sequences.

Rust coder/decoder for Nucleotide Archival Format (NAF) files.

Comparative genomics project of Ruminococcus gnavus, with additional prevalence and abundance analysis of worldwide metagenomic datasets.

Generate metagenome-assembled genomes of Ruminococcus gnavus from recurrent Clostridioides difficile infected patient metagenomes

LacyTools with some fixes

Rust re-implementation of the MinCED algorithm to Detect Instances of CRISPRs in Environmental Data.

Flask web application for PONGS project.

Code and tables for translation from variants to haplotypes.

MassyTools, ported to Python 3