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Leiden450K contains a couple of functions for preprocessing of Illumina Human 450K array data, such as reading idat files in parallel, filtering probes and normalization.

Interactive Volcano Plots

miRNA mRNA Expression Integration

Ansible role for PostgreSQL

Tools to work with and manipulate CouchDB and referenced files on the SRM

This repo contains source code for the paper "Controlling bias and inflation in epigenome- and transcriptomewide association studies using the empirical null distribution" by Maarten van Iterson, Erik W. van Zwet and Bastiaan T. Heijmans.

This role installs the System Security Services Daemon (SSSD). It will allow authentication from a Microsoft's Active Directory.

Generic transcriptome analysis pipeline