Explore projects
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Shiny app designed by Ben Johnson and Ruben van Helden to quickly analyse calcium trace outputs. Attached manual to explain the parameters and how to analyse your traces.
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Allele-specific expression (a.k.a. differential allelic expression) in breast cancer
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This repo contains source code for the paper "Controlling bias and inflation in epigenome- and transcriptomewide association studies using the empirical null distribution" by Maarten van Iterson, Erik W. van Zwet and Bastiaan T. Heijmans.
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Scripts used for differential gene expression analysis and its reporting (currently for RNA-seq data)
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Generate and Annotate DNAse-seq footprint with Transcription factor binding sites.
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