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Sam Nooij / rCDI resistome and MDRO analyses
BSD 3-Clause "New" or "Revised" LicenseAnalyses of antimicrobial resistance genes in metagenomic data from patients with (multiple) recurrent Clostridioides difficile infections and their faecal microbiota transplantation donors - with culture data from multidrug resistant organisms
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Engraftment calculations based on One Codex species-level taxonomic classifications of shotgun metagenomic read sets of the FECBUD trial - a collaboration between the Netherlands Donor Feces Bank and Vedanta Biosciences.
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Scripts used for differential gene expression analysis and its reporting (currently for RNA-seq data)
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Allele-specific expression (a.k.a. differential allelic expression) in breast cancer
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This project contains the downstream analysis of the miRNA and mRNA profile and also the network analysis
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Cats / KeyGenes
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