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Datastructuren LIACS

This pipeline takes paired-end fastq files, does a quick genome assembly on them (via Velvet + kmergenie), and predicts antibiotic resistance via abricate.

Mirror of Open Grid Engine code -- with modifications

Mirror of https://github.com/LUMC/extractor.git

(Unofficial) Cython bindings and Python interface to the NCBI C++ Toolkit.

Cython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.