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Programming course
Commits
a4f70cf5
Commit
a4f70cf5
authored
7 years ago
by
Mihai Lefter
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...
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@@ -23,7 +23,7 @@ be done in your own time (i.e., during the afternoons).
Please note that the above mentioned date and location are subject to change.
Program
Program
and Materials
-------
-
Mornings: presentations.
...
...
@@ -48,22 +48,15 @@ Program
| | 11-12 | Biopython | Guy |
| | 12-13 | Putting everything together | Jeroen |
Some of the lessons are slideshows, whereas others are just
notebooks we scroll through during class. The links above are all one-page
static renderings on
[
IPython Notebook Viewer
](
http://nbviewer.ipython.org/
)
.
Materials
---------
The top-level directory contains materials for the following lessons:
Assignments
-------
-
[
First day
](
https://classroom.github.com/a/QU2iPYKn
)
.
1.
Welcome (
[
slides
][
lesson_01
]
)
2.
Introduction to Python (
[
slides 1
][
lesson_02_01
]
,
[
slides 2
][
lesson_02_02
]
,
[
slides 3
][
lesson_02_03
]
)
3.
More Python Goodness (
[
notebook 1
][
lesson_03_01
]
,
[
notebook 2
][
lesson_03_02
]
)
4.
Working with NumPy arrays (
[
slides
][
lesson_04
]
)
5.
IPython Notebook (
[
notebook
][
lesson_05
]
)
6.
Plotting with matplotlib (
[
notebook
][
lesson_06
]
)
7.
Painting Pandas (
[
slides
][
lesson_07
]
)
8.
Object-oriented programming (
[
slides
][
lesson_08
]
)
9.
A sip of Biopython (
[
notebook 1
][
lesson_09_01
]
,
[
notebook 2
][
lesson_09_02
]
)
[
lesson_01
]:
http://nbviewer.ipython.org/urls/git.lumc.nl/courses/programming-course/raw/master/introduction/01_welcome.ipynb
[
lesson_02_01
]:
http://nbviewer.ipython.org/urls/git.lumc.nl/courses/programming-course/raw/master/introduction/02_introduction_to_python_1.ipynb
...
...
@@ -79,17 +72,10 @@ The top-level directory contains materials for the following lessons:
[
lesson_09_01
]:
http://nbviewer.ipython.org/urls/git.lumc.nl/courses/programming-course/raw/master/09%20-%20A%20sip%20of%20Biopython%20(1).ipynb
[
lesson_09_02
]:
http://nbviewer.ipython.org/urls/git.lumc.nl/courses/programming-course/raw/master/09%20-%20A%20sip%20of%20Biopython%20(2).ipynb
As indicated, some of the lessons are slideshows, whereas others are just
notebooks we scroll through during class. The links above are all one-page
static renderings on
[
IPython Notebook Viewer
](
http://nbviewer.ipython.org/
)
.
We also have a
[
repository with material for the assignments
](
https://git.lumc.nl/courses/programming-course-assignments
)
.
Software installation
---------------------
See the instructions
in
[
INSTALL.md
](
/INSTALL.md
)
.
See the instructions
[
here
](
https://docs.anaconda.com/anaconda/install/
)
.
Notebooks
---------
...
...
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