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courses
NGS-intro-course
Commits
ede09586
Commit
ede09586
authored
9 years ago
by
Laros
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Updated program and website.
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4 changed files
program/program.tex
+3
-1
3 additions, 1 deletion
program/program.tex
shared/variables.tex
+1
-1
1 addition, 1 deletion
shared/variables.tex
website/NGS-intro
+9
-11
9 additions, 11 deletions
website/NGS-intro
website/build.sh
+2
-1
2 additions, 1 deletion
website/build.sh
with
15 additions
and
14 deletions
program/program.tex
+
3
−
1
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ede09586
\documentclass
{
article
}
\documentclass
{
article
}
\usepackage
{
geometry
}
\input
{
../shared/variables.tex
}
\input
{
../shared/variables.tex
}
\title
{
\courseTitle
}
\title
{
\courseTitle
}
...
@@ -35,7 +37,7 @@ The practical covers the following:
...
@@ -35,7 +37,7 @@ The practical covers the following:
\section*
{
Day two,
\dayTwo
}
\section*
{
Day two,
\dayTwo
}
\begin{tabular}
{
r@
{
:
}
lp
{
8cm
}
l
}
\begin{tabular}
{
r@
{
:
}
lp
{
8cm
}
l
}
13
&
15
&
Combining tools into a pipeline
&
\person
Two
\\
13
&
15
&
Combining tools into a pipeline
&
\person
One
\\
13
&
45
&
Practical
\\
13
&
45
&
Practical
\\
\end{tabular}
\end{tabular}
...
...
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shared/variables.tex
+
1
−
1
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ede09586
\newcommand
{
\courseTitle
}{
NGS Introduction Course
}
\newcommand
{
\courseTitle
}{
NGS Introduction Course
}
\newcommand
{
\courseYear
}{
2015
}
\newcommand
{
\courseYear
}{
2015
}
\newcommand
{
\dayOne
}{
Tuesday, April 14
}
\newcommand
{
\dayOne
}{
Tuesday, April 14
}
\newcommand
{
\dayTwo
}{
Wednes
day, April 1
5
}
\newcommand
{
\dayTwo
}{
Fri
day, April 1
7
}
\newcommand
{
\personOne
}{
Jeroen Laros
}
\newcommand
{
\personOne
}{
Jeroen Laros
}
\newcommand
{
\personTwo
}{
Martijn Vermaat
}
\newcommand
{
\personTwo
}{
Martijn Vermaat
}
...
...
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website/NGS-intro
+
9
−
11
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ede09586
...
@@ -11,19 +11,17 @@ The [raw-attachment:program.pdf program].[[br]]
...
@@ -11,19 +11,17 @@ The [raw-attachment:program.pdf program].[[br]]
Command line [raw-attachment:cheatsheet.pdf cheat sheet].[[br]]
Command line [raw-attachment:cheatsheet.pdf cheat sheet].[[br]]
[wiki:NGS-intro-prep Preparations] for the practical.
[wiki:NGS-intro-prep Preparations] for the practical.
== Tuesday, April 1 ==
== Tuesday, April 1
4
==
[raw-attachment:
analysis_intro
.pdf Introduction to NGS data analysis] - M
ichiel
[raw-attachment:
introduction
.pdf Introduction to NGS data analysis] - M
artijn
van Galen
.[[br]]
Vermaat
.[[br]]
[raw-attachment:basics.pdf Operating system basics] - Jeroen Laros.[[br]]
[raw-attachment:basics.pdf Operating system basics] - Jeroen Laros.[[br]]
[raw-attachment:getting_started.pdf Getting started with NGS data analysis] -
[raw-attachment:getting_started.pdf Getting started with NGS data analysis] -
Michiel van Galen.[[br]]
Martijn Vermaat.[[br]]
[raw-attachment:installing.pdf Installing and updating software] - Jeroen
Laros.[[br]]
[raw-attachment:connecting.pdf Connecting to other machines] - Jeroen
[raw-attachment:connecting.pdf Connecting to other machines] - Jeroen
Laros.[[br]]
Laros.[[br]]
Practical [raw-attachment:practical
_one
.pdf handouts].
Practical [raw-attachment:
command_
practical.pdf handouts].
== Friday, April
4
==
== Friday, April
17
==
[raw-attachment:combining_tools.pdf Combining tools into a pipeline] -
Michiel
[raw-attachment:combining_tools.pdf Combining tools into a pipeline] -
Jeroen
van Galen
.[[br]]
Laros
.[[br]]
Practical [raw-attachment:practical
_two
.pdf handouts].
Practical [raw-attachment:
galaxy_
practical.pdf handouts].
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website/build.sh
+
2
−
1
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ede09586
#!/bin/sh
#!/bin/sh
src
=
"analysis_intro connecting installing basics practical_one combining_tools getting_started practical_two program"
src
=
"basics connecting getting_started combining_tools introduction program command_practical galaxy_practical"
for
i
in
$src
;
do
for
i
in
$src
;
do
cd
../
$i
cd
../
$i
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