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Created with Raphaël 2.2.021Jun201918171413121165429May2723222120151397629Apr262524231817161585429Mar2521201918141312875126Feb252221201918141174121Jan8731Dec241312117654329Nov272623222115131298752129Oct2625242322191817169827Sep2625241817131210643231Aug2928272423222120171615109863231Jul30272625242319181716131153228Jun2120191814131211876add SV task: survivor.wdladd SV task: delly.wdladd SV task: clever.wdladd SV task: bcftools.wdlMerge pull request #115 from biowdl/BIOWDL-253workaround8243workaround8243small mods to multiqc.wdlMerge branch 'develop' into BIOWDL-253BIOWDL-253BIOWDL-253always output to samfix bowtie runningfix idadd default output tablesindex solvedadd 6G memory runtime to clever and matecleverSVsSVsMerge pull request #113 from biowdl/small_fixesadd sam RG stuffremove obsolete task, fix typosmall_fixessmall_fixesadd bowtiefix star indexfix hisat2 index inputmodify index input for hisat2memory adjustmentssmall fixesMerge branch 'develop' into KG-295Merge pull request #111 from biowdl/BIOWDL-245simpler md5sum checkBIOWDL-245BIOWDL-245Merge pull request #110 from biowdl/BIOWDL-245addressed review commentsremove globadd some statsadd referencedictadd fasta faisremove more structsdestroy another structdestroy another structdestroy structssimplify furthersimplifyfix tabixfix tabixrewrite tabix