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Created with Raphaël 2.2.013Aug12111076529Jul2827232221201716151397632130Jun29262524232219181716151211109854228May20191815141311876130Apr282120151410987632131Mar3026252423201918161312119325Feb2420131211107654331Jan30292827242322212017161514131098update task/CHANGELOGupdate gridss: add --jvmheap parameterMerge branch 'develop' into add-vepMerge branch 'develop' into BIOWDL-487BIOWDL-487BIOWDL-487Change inputs to arrays.Change lima outputs.Merge pull request #234 from biowdl/BIOWDL-488Update CHANGELOG.mdMerge branch 'develop' into BIOWDL-488Merge branch 'develop' into BIOWDL-487Fix index localization.Merge pull request #236 from biowdl/gridssupdate CHANGELOGMerge branch 'develop' into gridssMerge remote-tracking branch 'remotes/origin/develop' into BIOWDL-488Merge pull request #239 from biowdl/BIOWDL-487Remove uncompressed output options.Increase time estimate for combining GVCFsfixjointgenotyp…fixjointgenotypingRemove left-over chmod.Add missingAdd index input to the tasks.Correct output naming.Add pacbio bam2fastx tool.Merge branch 'develop' into optional-interval-GenotypeGVCFsoptional-interv…optional-interval-GenotypeGVCFsadd missing category for outputType in bcftools viewOptional is not a valid category for our docs templateUpdate CHANGELOG.md to new versionAdd task for whatshap phasewhatshapwhatshapMerge branch 'develop' into optional-interval-GenotypeGVCFsUpdate changelogUpdate parameter metaMake intervals optional for GenotypeGVCFssetting next versionset version in changelog to stable versionv4.0.0v4.0.0update scriptsfix parameter_metaadd parameter_meta to gridssupdate changelogMerge remote-tracking branch 'origin/develop' into gridssMerge pull request #235 from biowdl/KG-549