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  • 5.29_update
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  • phhv1reassembly
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Created with Raphaël 2.2.024Oct211411723Sep1226Aug25232219181185229Jul2826184130Jun2322171630May8Apr18Mar987432125Feb2415141110928Jan27261918171411416Dec1514626Nov1715131211109829Oct28130Sep241723Aug20181029Jul2721201998752130Jun2928252221161514111072131May2825211920Apr1514131230Mar29252322191817118424Feb22211918169428Jan21158628Dec24221615119130Nov272625191712111096543230Oct2827262216151312987652129Sep24232116151411109742126Aug2420191817141312111076529Jul28272322typoAdd a task to produce fasta indicesfastp: use number of splits as number of threads if setincrease memory for fastpincrease memory for fastptypofix fastp taskfix some issues in fastp, add picard CollectInzertSizeMetricsadd fastptypo5.29_update5.29_updateupdate outputs for amber and cobaltupdate docker image for hmftools amber and cobaltMerge remote-tracking branch 'origin/develop' into 5.29_updatefix output names gripssupdate survivor versionbiowdl-595biowdl-595fix parameter_metafix some issuesMerge pull request #305 from biowdl/BIOWDL-596add missing required input for amberUpdate changelog with memory changeUse gebibytes instead of gigabytesUse gebibytes instead of Gigabytesminiwdlminiwdlfix sage ref genome versionadd docker for lilac, increase memory for cobaltfix some issuesstart adding lilacmake purple's somaticRainfallPlot output optionalchanges for WGSinCancerDiagnosticsupdate pave parameter_metaMerge remote-tracking branch 'origin/develop' into 5.29_updateMerge pull request #304 from biowdl/performanceupdate changelogMerge branch 'develop' into performanceincrease time for cobaltadjust purple commandadd more optinal inputs to Pavestart adjusting pave commandstart adjusting pave commandMerge remote-tracking branch 'origin' into 5.29_updateMerge pull request #303 from biowdl/sage