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Created with Raphaël 2.2.019Mar18161312119325Feb2420131211107654331Jan302928272423222120171615141310987617Dec12111096227Nov262519765131Oct3028159872127Sep26252423201817161312111096543229Aug2216151413126542131Jul2928272619181716151211109832127Jun262524rename outputBAM back to outputBam, remove booleanMerge pull request #199 from biowdl/resourceRequirementsMerge branch 'develop' into resourceRequirementsMerge pull request #197 from biowdl/add_UMI_separatorupdate changelogresourceRequire…resourceRequirementsupdate default fastqc container since it fixes several bugsdocs for compressionLeveluse more cores for cutadapt, update cutadapt version, explicitly set low compression levelmore threads for BWA by defaultUpdate umi-tools.wdladd_UMI_separatoradd_UMI_separatorUpdate CHANGELOG.mdMerge branch 'develop' into add_UMI_separatorsetting next versionupdate version in VERSION and CHANGELOG.mdv3.0.0 release_…v3.0.0 release_v3.0.0update scriptsMerge branch 'add_UMI_separator' of https://github.com/biowdl/tasks into add_UMI_separatorupdate CHANGELOGumiSeparator made optionalMerge branch 'develop' into add_UMI_separatorupdate CHANGELOGadd UMItools separatorMerge pull request #196 from biowdl/BIOWDL-390Update CHANGELOG.Update CHANGELOG.Last syntax update command section.Update command syntax.Rewrite command syntax.Rename tasks.Add missing plus sign.Remove weird newline.Merge https://github.com/biowdl/tasks into BIOWDL-390Update IsoSeq3 WDL file.fix umitools dedup outputfix umitools dedup outputMerge branch 'develop' of https://github.com/biowdl/tasks into BIOWDL-390.Update CHANGELOG.Merge pull request #195 from biowdl/umi_statsUpdate CHANGELOG.mdupdate changelogUpdate parameter_meta Lima.wdl.