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Created with Raphaël 2.2.022Feb211918169428Jan21158628Dec24221615119130Nov272625191712111096543230Oct2827262216151312987652129Sep24232116151411109742126Aug2420191817141312111076529Jul2827232221201716151397632130Jun29262524232219181716151211109854228May20191815141311876130Apr282120151410987632131Mar3026252423201918161312update CHANGELOGfix purple output for newer versionadd option for bcftools view filteringadd bcftools view filtering optionsupdate changelogtask: add duphold.wdladd index to htseqrefOptionalrefOptionaladd -c to stringtiefix sagefix missing backslashfix parameter_meta purpleupdate versions, memory, etcsmall adjustmentsadd health-checkerMerge pull request #269 from tomkuipers1402/developchange threadsadd extractSigPredictHRDfix some issues, add flagstatfix typosadd linx task, add more inputs to sagemake reference annotation optional for gffcomparecomment out healthchecker task and remove duplicate input in bcftools annotateMerge remote-tracking branch 'origin/develop' into sageadd note to HealthCheckerannotation updatestyle updateadd tasks to create input files for DGE analysisupdate changelogadd purple outputsadd some taksremove duphold parameterfix outputpathadd duphold.wdladd dupholdbcftools: rm memory parameter metaMerge pull request #268 from biowdl/BIOWDL-536Use github actions CIadd duphold paramater in smooveMerge pull request #266 from biowdl/BIOWDL-532Update changelog.