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Created with Raphaël 2.2.010Jul9832127Jun26252421201918171413121165429May2723222120151397629Apr262524231817161585429Mar2521201918141312875126Feb252221201918141174121Jan8731Dec241312117654329Nov272623222115131298752129Oct2625242322191817169827Sep2625241817131210643231Aug2928272423222120171615109863231Jul302726252423191817161311532add memory requirementKG-295KG-295use wisestork with proper biocontainersMerge remote-tracking branch 'origin/develop' into KG-295Merge pull request #119 from biowdl/BIOWDL-265Merge branch 'BIOWDL-265' of https://github.com/biowdl/tasks into BIOWDL-265BIOWDL-265BIOWDL-265some changesfix bugadd task for chunked-scatterMerge remote-tracking branch 'origin/develop' into BIOWDL-265Merge remote-tracking branch 'origin/develop' into bwakitremove -o pipefail from bwakitfix bugsmall fixesadd bwakit taskMerge pull request #118 from biowdl/BIOWDL-247fixfix output bamvalid wdlfix samtoolsimprove indexinguniversal indexingBIOWDL-247BIOWDL-247simpler mkdiraddress strelka and manta changesrequest less memoryMerge branch 'develop' into BIOWDL-247dockerImage gffcompare.wdldockerImage for gffread and CPATmodify clever.wdl: increased memory from 6G to 10Gmake sure outputpath existsMerge pull request #117 from Amfgcp/panel_of_normalsadd panel of normals option to mutect2modify delly.wdl: increased memory to 10Gmodify delly.wdl: replaced string "5G" to integer 5 in memory runtimemodify clever.wdl: replaced string "6G" to integer 6 in memory runtimeMerge branch 'develop' into KG-295dockerimage htseq collect-collumnsremove structstringtie to dockerImagehisat2 dockerImageMerge branch 'BIOWDL-247' of https://github.com/biowdl/tasks into BIOWDL-247